Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh11P55288 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.65□□□□□ -0.55
Cdh11P55288 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cdh11P55288 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdh11P55288 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdh11P55288 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdh11P55288 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.55
Cdh11P55288 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.65□□□□□ -0.55
Cdh11P55288 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdh11P55288 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cdh11P55288 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdh11P55288 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.64□□□□□ -0.55
Cdh11P55288 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdh11P55288 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdh11P55288 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Gm44397-201ENSMUST00000195950 113 ntBASIC11.64□□□□□ -0.55
Cdh11P55288 Gm42550-201ENSMUST00000201553 960 ntBASIC11.64□□□□□ -0.55
Cdh11P55288 Gm7287-201ENSMUST00000205267 602 ntBASIC11.64□□□□□ -0.55
Cdh11P55288 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdh11P55288 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.64□□□□□ -0.55
Cdh11P55288 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.64□□□□□ -0.55
Cdh11P55288 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Cdh11P55288 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cdh11P55288 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdh11P55288 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh11P55288 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cdh11P55288 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdh11P55288 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.63□□□□□ -0.55
Cdh11P55288 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdh11P55288 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.63□□□□□ -0.55
Cdh11P55288 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.63□□□□□ -0.55
Cdh11P55288 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdh11P55288 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdh11P55288 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.63□□□□□ -0.55
Cdh11P55288 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.63□□□□□ -0.55
Cdh11P55288 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.63□□□□□ -0.55
Cdh11P55288 Mir7085-201ENSMUST00000184353 66 ntBASIC11.63□□□□□ -0.55
Cdh11P55288 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdh11P55288 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Cdh11P55288 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.63□□□□□ -0.55
Cdh11P55288 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Cdh11P55288 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Cdh11P55288 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdh11P55288 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cdh11P55288 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms