Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx3P50481 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx3P50481 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx3P50481 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx3P50481 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx3P50481 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lhx3P50481 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lhx3P50481 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lhx3P50481 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.9□□□□□ -0.34
Lhx3P50481 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.9□□□□□ -0.34
Lhx3P50481 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Lhx3P50481 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Gm25214-201ENSMUST00000104573 129 ntBASIC12.9□□□□□ -0.34
Lhx3P50481 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lhx3P50481 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Lhx3P50481 Gm12058-201ENSMUST00000118614 437 ntBASIC12.9□□□□□ -0.34
Lhx3P50481 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.9□□□□□ -0.34
Lhx3P50481 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.9□□□□□ -0.34
Lhx3P50481 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Lhx3P50481 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Lhx3P50481 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.9□□□□□ -0.34
Lhx3P50481 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.9□□□□□ -0.34
Lhx3P50481 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.9□□□□□ -0.34
Lhx3P50481 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.9□□□□□ -0.34
Lhx3P50481 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.9□□□□□ -0.34
Lhx3P50481 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.9□□□□□ -0.34
Lhx3P50481 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.9□□□□□ -0.34
Lhx3P50481 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Lhx3P50481 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lhx3P50481 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx3P50481 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lhx3P50481 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lhx3P50481 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.89□□□□□ -0.35
Lhx3P50481 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lhx3P50481 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.89□□□□□ -0.35
Lhx3P50481 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Lhx3P50481 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Lhx3P50481 Gm11531-201ENSMUST00000117614 555 ntBASIC12.89□□□□□ -0.35
Lhx3P50481 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.89□□□□□ -0.35
Lhx3P50481 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.89□□□□□ -0.35
Lhx3P50481 Rmrp-201ENSMUST00000157463 271 ntBASIC12.89□□□□□ -0.35
Lhx3P50481 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Gm43758-201ENSMUST00000199500 367 ntBASIC12.89□□□□□ -0.35
Lhx3P50481 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Gm5950-201ENSMUST00000213337 772 ntBASIC12.89□□□□□ -0.35
Lhx3P50481 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Gm39404-201ENSMUST00000216350 313 ntBASIC12.89□□□□□ -0.35
Lhx3P50481 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.89□□□□□ -0.35
Lhx3P50481 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Gm26035-201ENSMUST00000083065 308 ntBASIC12.89□□□□□ -0.35
Lhx3P50481 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lhx3P50481 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.89□□□□□ -0.35
Lhx3P50481 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Lhx3P50481 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx3P50481 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.88□□□□□ -0.35
Lhx3P50481 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lhx3P50481 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms