Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.47□□□□□ -0.25
Shmt1P50431 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Shmt1P50431 Gm13492-201ENSMUST00000119772 665 ntBASIC13.47□□□□□ -0.25
Shmt1P50431 Gm11964-201ENSMUST00000120982 444 ntBASIC13.47□□□□□ -0.25
Shmt1P50431 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.47□□□□□ -0.25
Shmt1P50431 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.47□□□□□ -0.25
Shmt1P50431 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.47□□□□□ -0.25
Shmt1P50431 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.47□□□□□ -0.25
Shmt1P50431 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.47□□□□□ -0.25
Shmt1P50431 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.47□□□□□ -0.25
Shmt1P50431 Gm37489-201ENSMUST00000191883 159 ntBASIC13.47□□□□□ -0.25
Shmt1P50431 Gm38341-201ENSMUST00000195357 515 ntBASIC13.47□□□□□ -0.25
Shmt1P50431 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Gm5904-201ENSMUST00000210286 865 ntBASIC13.47□□□□□ -0.25
Shmt1P50431 Morn2-202ENSMUST00000227729 656 ntBASIC13.47□□□□□ -0.25
Shmt1P50431 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Shmt1P50431 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Shmt1P50431 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.47□□□□□ -0.25
Shmt1P50431 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.47□□□□□ -0.25
Shmt1P50431 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Shmt1P50431 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Shmt1P50431 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Shmt1P50431 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Shmt1P50431 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shmt1P50431 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Shmt1P50431 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.46□□□□□ -0.25
Shmt1P50431 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.46□□□□□ -0.25
Shmt1P50431 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Shmt1P50431 Gm2991-201ENSMUST00000173338 480 ntBASIC13.46□□□□□ -0.25
Shmt1P50431 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.46□□□□□ -0.25
Shmt1P50431 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.46□□□□□ -0.25
Shmt1P50431 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.46□□□□□ -0.25
Shmt1P50431 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.46□□□□□ -0.25
Shmt1P50431 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Shmt1P50431 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Shmt1P50431 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.46□□□□□ -0.25
Shmt1P50431 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.46□□□□□ -0.25
Shmt1P50431 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shmt1P50431 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Shmt1P50431 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shmt1P50431 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.46□□□□□ -0.26
Shmt1P50431 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shmt1P50431 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.46□□□□□ -0.26
Shmt1P50431 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shmt1P50431 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.46□□□□□ -0.26
Shmt1P50431 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Shmt1P50431 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shmt1P50431 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shmt1P50431 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shmt1P50431 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shmt1P50431 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.45□□□□□ -0.26
Shmt1P50431 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Shmt1P50431 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Shmt1P50431 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Shmt1P50431 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.45□□□□□ -0.26
Shmt1P50431 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.45□□□□□ -0.26
Shmt1P50431 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Shmt1P50431 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms