Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Prox1P48437 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.27□□□□□ -0.45
Prox1P48437 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.27□□□□□ -0.45
Prox1P48437 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Prox1P48437 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.27□□□□□ -0.45
Prox1P48437 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.27□□□□□ -0.45
Prox1P48437 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Prox1P48437 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.27□□□□□ -0.45
Prox1P48437 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.27□□□□□ -0.45
Prox1P48437 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.27□□□□□ -0.45
Prox1P48437 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Prox1P48437 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Prox1P48437 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Prox1P48437 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.27□□□□□ -0.45
Prox1P48437 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Prox1P48437 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.27□□□□□ -0.45
Prox1P48437 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.27□□□□□ -0.45
Prox1P48437 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Prox1P48437 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.26□□□□□ -0.45
Prox1P48437 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Prox1P48437 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Prox1P48437 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Gm12151-201ENSMUST00000121374 290 ntBASIC12.26□□□□□ -0.45
Prox1P48437 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Prox1P48437 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Prox1P48437 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Prox1P48437 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.26□□□□□ -0.45
Prox1P48437 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Prox1P48437 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Prox1P48437 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Prox1P48437 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Prox1P48437 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.26□□□□□ -0.45
Prox1P48437 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prox1P48437 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Prox1P48437 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.25□□□□□ -0.45
Prox1P48437 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Gm43094-201ENSMUST00000196549 921 ntBASIC12.25□□□□□ -0.45
Prox1P48437 Gm44124-201ENSMUST00000204159 472 ntBASIC12.25□□□□□ -0.45
Prox1P48437 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.25□□□□□ -0.45
Prox1P48437 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms