Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.54□□□□□ -0.56
Rfx3P48381 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.54□□□□□ -0.56
Rfx3P48381 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.54□□□□□ -0.56
Rfx3P48381 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.54□□□□□ -0.56
Rfx3P48381 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.54□□□□□ -0.56
Rfx3P48381 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rfx3P48381 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rfx3P48381 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfx3P48381 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.54□□□□□ -0.56
Rfx3P48381 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rfx3P48381 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rfx3P48381 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.54□□□□□ -0.56
Rfx3P48381 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.54□□□□□ -0.56
Rfx3P48381 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Rfx3P48381 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.53□□□□□ -0.56
Rfx3P48381 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.53□□□□□ -0.56
Rfx3P48381 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.53□□□□□ -0.56
Rfx3P48381 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Gm12928-201ENSMUST00000117115 573 ntBASIC11.53□□□□□ -0.56
Rfx3P48381 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.53□□□□□ -0.56
Rfx3P48381 Gm6152-201ENSMUST00000151704 340 ntBASIC11.53□□□□□ -0.56
Rfx3P48381 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Rfx3P48381 Gm18473-201ENSMUST00000220543 868 ntBASIC11.53□□□□□ -0.56
Rfx3P48381 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rfx3P48381 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rfx3P48381 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.53□□□□□ -0.56
Rfx3P48381 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Rfx3P48381 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rfx3P48381 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Rfx3P48381 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfx3P48381 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rfx3P48381 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Rfx3P48381 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.52□□□□□ -0.56
Rfx3P48381 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rfx3P48381 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rfx3P48381 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rfx3P48381 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.52□□□□□ -0.56
Rfx3P48381 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rfx3P48381 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rfx3P48381 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rfx3P48381 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rfx3P48381 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rfx3P48381 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rfx3P48381 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.52□□□□□ -0.57
Rfx3P48381 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.52□□□□□ -0.57
Rfx3P48381 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rfx3P48381 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Rfx3P48381 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Rfx3P48381 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rfx3P48381 Gm16202-201ENSMUST00000117532 544 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms