Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Sox18P43680 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.35□□□□□ -0.43
Sox18P43680 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.35□□□□□ -0.43
Sox18P43680 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sox18P43680 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Sox18P43680 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Sox18P43680 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox18P43680 Gm18829-201ENSMUST00000188150 1622 ntBASIC12.34□□□□□ -0.43
Sox18P43680 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox18P43680 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox18P43680 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Sox18P43680 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.34□□□□□ -0.43
Sox18P43680 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.34□□□□□ -0.43
Sox18P43680 Gm13408-201ENSMUST00000119822 798 ntBASIC12.34□□□□□ -0.43
Sox18P43680 Gm13935-201ENSMUST00000121859 798 ntBASIC12.34□□□□□ -0.43
Sox18P43680 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox18P43680 Gm27552-201ENSMUST00000183351 62 ntBASIC12.34□□□□□ -0.43
Sox18P43680 Gm27844-201ENSMUST00000183613 62 ntBASIC12.34□□□□□ -0.43
Sox18P43680 Gm29011-201ENSMUST00000191059 712 ntBASIC12.34□□□□□ -0.43
Sox18P43680 Gm43906-201ENSMUST00000203194 906 ntBASIC12.34□□□□□ -0.43
Sox18P43680 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox18P43680 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox18P43680 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Sox18P43680 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox18P43680 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox18P43680 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox18P43680 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox18P43680 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox18P43680 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Sox18P43680 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.33□□□□□ -0.43
Sox18P43680 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox18P43680 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Sox18P43680 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox18P43680 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox18P43680 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Sox18P43680 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.33□□□□□ -0.44
Sox18P43680 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox18P43680 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.33□□□□□ -0.44
Sox18P43680 Gm16112-201ENSMUST00000159075 382 ntBASIC12.33□□□□□ -0.44
Sox18P43680 Gm8190-201ENSMUST00000199603 586 ntBASIC12.33□□□□□ -0.44
Sox18P43680 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Gm44651-201ENSMUST00000207343 372 ntBASIC12.33□□□□□ -0.44
Sox18P43680 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.33□□□□□ -0.44
Sox18P43680 Gm7439-201ENSMUST00000214053 835 ntBASIC12.33□□□□□ -0.44
Sox18P43680 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.33□□□□□ -0.44
Sox18P43680 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sox18P43680 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox18P43680 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.33□□□□□ -0.44
Sox18P43680 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms