Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col18a1P39061 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col18a1P39061 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Col18a1P39061 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col18a1P39061 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.45■□□□□ 0.22
Col18a1P39061 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col18a1P39061 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col18a1P39061 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col18a1P39061 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col18a1P39061 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Col18a1P39061 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Gm43334-201ENSMUST00000197740 1318 ntBASIC16.44■□□□□ 0.22
Col18a1P39061 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col18a1P39061 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.44■□□□□ 0.22
Col18a1P39061 Mir181d-201ENSMUST00000102383 72 ntBASIC16.44■□□□□ 0.22
Col18a1P39061 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC16.44■□□□□ 0.22
Col18a1P39061 Gm7719-201ENSMUST00000182374 975 ntBASIC16.44■□□□□ 0.22
Col18a1P39061 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Gm9916-201ENSMUST00000192943 1228 ntBASIC16.44■□□□□ 0.22
Col18a1P39061 Gm37852-201ENSMUST00000193027 350 ntBASIC16.44■□□□□ 0.22
Col18a1P39061 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Col18a1P39061 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Col18a1P39061 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Col18a1P39061 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Col18a1P39061 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Col18a1P39061 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col18a1P39061 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col18a1P39061 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC16.43■□□□□ 0.22
Col18a1P39061 Gm13117-201ENSMUST00000120894 691 ntBASIC16.43■□□□□ 0.22
Col18a1P39061 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC16.43■□□□□ 0.22
Col18a1P39061 Gm25998-201ENSMUST00000175397 53 ntBASIC16.43■□□□□ 0.22
Col18a1P39061 Gm30671-201ENSMUST00000214898 318 ntBASIC16.43■□□□□ 0.22
Col18a1P39061 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col18a1P39061 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col18a1P39061 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.43■□□□□ 0.22
Col18a1P39061 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col18a1P39061 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.43■□□□□ 0.22
Col18a1P39061 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC16.43■□□□□ 0.22
Col18a1P39061 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Col18a1P39061 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Gm17931-201ENSMUST00000208132 634 ntBASIC16.43■□□□□ 0.22
Col18a1P39061 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC16.43■□□□□ 0.22
Col18a1P39061 AC114645.1-201ENSMUST00000215831 187 ntBASIC16.43■□□□□ 0.22
Col18a1P39061 Arhgef33-210ENSMUST00000225548 456 ntBASIC16.43■□□□□ 0.22
Col18a1P39061 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC16.43■□□□□ 0.22
Col18a1P39061 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col18a1P39061 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col18a1P39061 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col18a1P39061 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col18a1P39061 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col18a1P39061 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col18a1P39061 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col18a1P39061 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col18a1P39061 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col18a1P39061 Gm12791-201ENSMUST00000120788 655 ntBASIC16.42■□□□□ 0.22
Col18a1P39061 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col18a1P39061 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col18a1P39061 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col18a1P39061 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col18a1P39061 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col18a1P39061 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.42■□□□□ 0.22
Col18a1P39061 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col18a1P39061 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Col18a1P39061 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col18a1P39061 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.42■□□□□ 0.22
Col18a1P39061 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Col18a1P39061 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.42■□□□□ 0.22
Col18a1P39061 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col18a1P39061 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col18a1P39061 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Col18a1P39061 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms