Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.85□□□□□ -0.51
Thbs1P35441 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Thbs1P35441 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.84□□□□□ -0.51
Thbs1P35441 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Thbs1P35441 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Rubie-203ENSMUST00000227803 2430 ntBASIC11.84□□□□□ -0.51
Thbs1P35441 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.84□□□□□ -0.51
Thbs1P35441 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.84□□□□□ -0.51
Thbs1P35441 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Thbs1P35441 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.84□□□□□ -0.51
Thbs1P35441 Gm27892-201ENSMUST00000185017 106 ntBASIC11.84□□□□□ -0.51
Thbs1P35441 Gm37042-201ENSMUST00000193816 581 ntBASIC11.84□□□□□ -0.51
Thbs1P35441 AY702102-202ENSMUST00000194651 1173 ntBASIC11.84□□□□□ -0.51
Thbs1P35441 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.84□□□□□ -0.51
Thbs1P35441 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.84□□□□□ -0.51
Thbs1P35441 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.84□□□□□ -0.51
Thbs1P35441 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Thbs1P35441 Gm9899-201ENSMUST00000065519 555 ntBASIC11.84□□□□□ -0.51
Thbs1P35441 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Thbs1P35441 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Thbs1P35441 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Thbs1P35441 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Thbs1P35441 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Thbs1P35441 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs1P35441 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Thbs1P35441 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Thbs1P35441 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Thbs1P35441 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Thbs1P35441 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.83□□□□□ -0.52
Thbs1P35441 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Thbs1P35441 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Thbs1P35441 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Thbs1P35441 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Thbs1P35441 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Thbs1P35441 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Gm23363-201ENSMUST00000175024 79 ntBASIC11.83□□□□□ -0.52
Thbs1P35441 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.83□□□□□ -0.52
Thbs1P35441 Gm19080-201ENSMUST00000196082 550 ntBASIC11.83□□□□□ -0.52
Thbs1P35441 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.83□□□□□ -0.52
Thbs1P35441 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.83□□□□□ -0.52
Thbs1P35441 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.83□□□□□ -0.52
Thbs1P35441 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Thbs1P35441 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs1P35441 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms