Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.77□□□□□ -0.53
Sftpa1P35242 Gm8018-201ENSMUST00000173536 789 ntBASIC11.77□□□□□ -0.53
Sftpa1P35242 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.77□□□□□ -0.53
Sftpa1P35242 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.77□□□□□ -0.53
Sftpa1P35242 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.77□□□□□ -0.53
Sftpa1P35242 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.77□□□□□ -0.53
Sftpa1P35242 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.77□□□□□ -0.53
Sftpa1P35242 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.77□□□□□ -0.53
Sftpa1P35242 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sftpa1P35242 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sftpa1P35242 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.77□□□□□ -0.53
Sftpa1P35242 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.77□□□□□ -0.53
Sftpa1P35242 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.77□□□□□ -0.53
Sftpa1P35242 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Sftpa1P35242 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.77□□□□□ -0.53
Sftpa1P35242 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sftpa1P35242 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.76□□□□□ -0.53
Sftpa1P35242 Gm12380-201ENSMUST00000119012 544 ntBASIC11.76□□□□□ -0.53
Sftpa1P35242 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.76□□□□□ -0.53
Sftpa1P35242 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.76□□□□□ -0.53
Sftpa1P35242 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Ntng1-201ENSMUST00000051253 327 ntBASIC11.76□□□□□ -0.53
Sftpa1P35242 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.76□□□□□ -0.53
Sftpa1P35242 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sftpa1P35242 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sftpa1P35242 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Sftpa1P35242 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Sftpa1P35242 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.75□□□□□ -0.53
Sftpa1P35242 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Sftpa1P35242 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sftpa1P35242 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.75□□□□□ -0.53
Sftpa1P35242 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sftpa1P35242 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.75□□□□□ -0.53
Sftpa1P35242 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.75□□□□□ -0.53
Sftpa1P35242 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sftpa1P35242 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms