Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nckap1P28660 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nckap1P28660 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.71□□□□□ -0.37
Nckap1P28660 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Daam2-202ENSMUST00000224595 1926 ntBASIC12.71□□□□□ -0.37
Nckap1P28660 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.71□□□□□ -0.37
Nckap1P28660 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nckap1P28660 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.71□□□□□ -0.37
Nckap1P28660 Gm2383-201ENSMUST00000181461 807 ntBASIC12.71□□□□□ -0.37
Nckap1P28660 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.71□□□□□ -0.37
Nckap1P28660 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nckap1P28660 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.71□□□□□ -0.37
Nckap1P28660 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.71□□□□□ -0.37
Nckap1P28660 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Nckap1P28660 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.71□□□□□ -0.37
Nckap1P28660 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.71□□□□□ -0.37
Nckap1P28660 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.71□□□□□ -0.37
Nckap1P28660 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nckap1P28660 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nckap1P28660 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.7□□□□□ -0.38
Nckap1P28660 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.7□□□□□ -0.38
Nckap1P28660 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.7□□□□□ -0.38
Nckap1P28660 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.7□□□□□ -0.38
Nckap1P28660 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.7□□□□□ -0.38
Nckap1P28660 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Nckap1P28660 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Nckap1P28660 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nckap1P28660 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.7□□□□□ -0.38
Nckap1P28660 Gm38092-201ENSMUST00000195600 653 ntBASIC12.7□□□□□ -0.38
Nckap1P28660 Gm44405-201ENSMUST00000198952 126 ntBASIC12.7□□□□□ -0.38
Nckap1P28660 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.7□□□□□ -0.38
Nckap1P28660 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.7□□□□□ -0.38
Nckap1P28660 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.7□□□□□ -0.38
Nckap1P28660 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.7□□□□□ -0.38
Nckap1P28660 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.7□□□□□ -0.38
Nckap1P28660 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.7□□□□□ -0.38
Nckap1P28660 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nckap1P28660 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nckap1P28660 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms