Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Gm12859-201ENSMUST00000117834 427 ntBASIC12.26□□□□□ -0.45
BdnfP21237 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.26□□□□□ -0.45
BdnfP21237 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.26□□□□□ -0.45
BdnfP21237 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Auts2-212ENSMUST00000178555 309 ntBASIC12.26□□□□□ -0.45
BdnfP21237 Mir6392-201ENSMUST00000184924 108 ntBASIC12.26□□□□□ -0.45
BdnfP21237 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.26□□□□□ -0.45
BdnfP21237 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.26□□□□□ -0.45
BdnfP21237 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.26□□□□□ -0.45
BdnfP21237 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
BdnfP21237 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
BdnfP21237 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.25□□□□□ -0.45
BdnfP21237 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
BdnfP21237 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
BdnfP21237 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
BdnfP21237 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
BdnfP21237 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.25□□□□□ -0.45
BdnfP21237 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
BdnfP21237 Gm37917-201ENSMUST00000194711 392 ntBASIC12.25□□□□□ -0.45
BdnfP21237 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.25□□□□□ -0.45
BdnfP21237 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.25□□□□□ -0.45
BdnfP21237 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
BdnfP21237 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
BdnfP21237 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
BdnfP21237 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.25□□□□□ -0.45
BdnfP21237 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.25□□□□□ -0.45
BdnfP21237 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.25□□□□□ -0.45
BdnfP21237 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.25□□□□□ -0.45
BdnfP21237 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.25□□□□□ -0.45
BdnfP21237 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BdnfP21237 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
BdnfP21237 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
BdnfP21237 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
BdnfP21237 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.24□□□□□ -0.45
BdnfP21237 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
BdnfP21237 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.24□□□□□ -0.45
BdnfP21237 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Mir6977-201ENSMUST00000184960 64 ntBASIC12.24□□□□□ -0.45
BdnfP21237 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.24□□□□□ -0.45
BdnfP21237 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
BdnfP21237 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.24□□□□□ -0.45
BdnfP21237 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
BdnfP21237 Gm5035-201ENSMUST00000215581 927 ntBASIC12.24□□□□□ -0.45
BdnfP21237 Gm18624-201ENSMUST00000220966 658 ntBASIC12.24□□□□□ -0.45
BdnfP21237 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.24□□□□□ -0.45
BdnfP21237 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.24□□□□□ -0.45
BdnfP21237 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
BdnfP21237 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
BdnfP21237 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms