Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VimP20152 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.93□□□□□ -0.34
VimP20152 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VimP20152 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.93□□□□□ -0.34
VimP20152 Gm9824-201ENSMUST00000178707 561 ntBASIC12.93□□□□□ -0.34
VimP20152 Gm10766-202ENSMUST00000194123 606 ntBASIC12.93□□□□□ -0.34
VimP20152 Gm19184-201ENSMUST00000196798 928 ntBASIC12.93□□□□□ -0.34
VimP20152 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.93□□□□□ -0.34
VimP20152 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VimP20152 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.93□□□□□ -0.34
VimP20152 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Gm10819-201ENSMUST00000099988 561 ntBASIC12.93□□□□□ -0.34
VimP20152 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VimP20152 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.93□□□□□ -0.34
VimP20152 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VimP20152 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.93□□□□□ -0.34
VimP20152 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VimP20152 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VimP20152 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VimP20152 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
VimP20152 Gm15393-201ENSMUST00000120499 219 ntBASIC12.92□□□□□ -0.34
VimP20152 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.92□□□□□ -0.34
VimP20152 Rprl2-201ENSMUST00000157150 290 ntBASIC12.92□□□□□ -0.34
VimP20152 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VimP20152 Gm7063-201ENSMUST00000186840 981 ntBASIC12.92□□□□□ -0.34
VimP20152 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.92□□□□□ -0.34
VimP20152 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Gm21362-201ENSMUST00000194272 928 ntBASIC12.92□□□□□ -0.34
VimP20152 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
VimP20152 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VimP20152 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.92□□□□□ -0.34
VimP20152 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VimP20152 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
VimP20152 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VimP20152 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
VimP20152 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.91□□□□□ -0.34
VimP20152 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.91□□□□□ -0.34
VimP20152 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
VimP20152 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.91□□□□□ -0.34
VimP20152 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.91□□□□□ -0.34
VimP20152 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.91□□□□□ -0.34
VimP20152 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.91□□□□□ -0.34
VimP20152 Gm27390-201ENSMUST00000184516 176 ntBASIC12.91□□□□□ -0.34
VimP20152 Gm2651-201ENSMUST00000203560 838 ntBASIC12.91□□□□□ -0.34
VimP20152 Gm5425-201ENSMUST00000214125 459 ntBASIC12.91□□□□□ -0.34
VimP20152 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.91□□□□□ -0.34
VimP20152 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.91□□□□□ -0.34
VimP20152 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VimP20152 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VimP20152 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms