Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.34□□□□□ -0.75
Cdx1P18111 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.34□□□□□ -0.75
Cdx1P18111 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cdx1P18111 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cdx1P18111 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Cdx1P18111 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Gm2445-201ENSMUST00000182798 989 ntBASIC10.34□□□□□ -0.75
Cdx1P18111 Gm6745-201ENSMUST00000199216 526 ntBASIC10.34□□□□□ -0.75
Cdx1P18111 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.34□□□□□ -0.75
Cdx1P18111 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.34□□□□□ -0.75
Cdx1P18111 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cdx1P18111 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.34□□□□□ -0.75
Cdx1P18111 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cdx1P18111 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.34□□□□□ -0.75
Cdx1P18111 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdx1P18111 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.34□□□□□ -0.75
Cdx1P18111 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.34□□□□□ -0.75
Cdx1P18111 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdx1P18111 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.34□□□□□ -0.75
Cdx1P18111 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx1P18111 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Cdx1P18111 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdx1P18111 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cdx1P18111 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cdx1P18111 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdx1P18111 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Cdx1P18111 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cdx1P18111 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.33□□□□□ -0.76
Cdx1P18111 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdx1P18111 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cdx1P18111 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Gm9522-201ENSMUST00000182394 926 ntBASIC10.33□□□□□ -0.76
Cdx1P18111 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdx1P18111 Gm37230-201ENSMUST00000194491 818 ntBASIC10.33□□□□□ -0.76
Cdx1P18111 Gm42612-201ENSMUST00000197986 623 ntBASIC10.33□□□□□ -0.76
Cdx1P18111 Gm43170-201ENSMUST00000199827 612 ntBASIC10.33□□□□□ -0.76
Cdx1P18111 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.33□□□□□ -0.76
Cdx1P18111 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.33□□□□□ -0.76
Cdx1P18111 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.33□□□□□ -0.76
Cdx1P18111 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.33□□□□□ -0.76
Cdx1P18111 Gm6180-201ENSMUST00000065243 498 ntBASIC10.33□□□□□ -0.76
Cdx1P18111 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.33□□□□□ -0.76
Cdx1P18111 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.33□□□□□ -0.76
Cdx1P18111 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.33□□□□□ -0.76
Cdx1P18111 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx1P18111 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms