Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga1P17095 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga1P17095 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga1P17095 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.98□□□□□ -0.33
Hmga1P17095 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.98□□□□□ -0.33
Hmga1P17095 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.98□□□□□ -0.33
Hmga1P17095 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hmga1P17095 Gm14017-201ENSMUST00000121934 386 ntBASIC12.98□□□□□ -0.33
Hmga1P17095 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.98□□□□□ -0.33
Hmga1P17095 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hmga1P17095 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Gm18304-201ENSMUST00000189162 546 ntBASIC12.98□□□□□ -0.33
Hmga1P17095 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.98□□□□□ -0.33
Hmga1P17095 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Gm10312-201ENSMUST00000078515 489 ntBASIC12.98□□□□□ -0.33
Hmga1P17095 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.98□□□□□ -0.33
Hmga1P17095 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.98□□□□□ -0.33
Hmga1P17095 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.98□□□□□ -0.33
Hmga1P17095 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hmga1P17095 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.98□□□□□ -0.33
Hmga1P17095 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hmga1P17095 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga1P17095 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.97□□□□□ -0.33
Hmga1P17095 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Hmga1P17095 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.97□□□□□ -0.33
Hmga1P17095 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.97□□□□□ -0.33
Hmga1P17095 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Hmga1P17095 Gm24231-201ENSMUST00000104315 133 ntBASIC12.97□□□□□ -0.33
Hmga1P17095 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hmga1P17095 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Gm12015-201ENSMUST00000117065 843 ntBASIC12.97□□□□□ -0.33
Hmga1P17095 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.97□□□□□ -0.33
Hmga1P17095 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Hmga1P17095 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Gm25700-201ENSMUST00000177693 110 ntBASIC12.97□□□□□ -0.33
Hmga1P17095 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hmga1P17095 Gm18827-201ENSMUST00000188341 790 ntBASIC12.97□□□□□ -0.33
Hmga1P17095 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.97□□□□□ -0.33
Hmga1P17095 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hmga1P17095 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.97□□□□□ -0.33
Hmga1P17095 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Hmga1P17095 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.97□□□□□ -0.33
Hmga1P17095 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.97□□□□□ -0.33
Hmga1P17095 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.97□□□□□ -0.33
Hmga1P17095 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.97□□□□□ -0.33
Hmga1P17095 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hmga1P17095 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hmga1P17095 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.97□□□□□ -0.33
Hmga1P17095 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.97□□□□□ -0.33
Hmga1P17095 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hmga1P17095 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmga1P17095 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmga1P17095 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Hmga1P17095 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmga1P17095 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hmga1P17095 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.96□□□□□ -0.33
Hmga1P17095 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmga1P17095 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmga1P17095 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmga1P17095 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms