Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.78□□□□□ -0.2
RaraP11416 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.78□□□□□ -0.2
RaraP11416 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.78□□□□□ -0.2
RaraP11416 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RaraP11416 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RaraP11416 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RaraP11416 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
RaraP11416 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.78□□□□□ -0.2
RaraP11416 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RaraP11416 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RaraP11416 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RaraP11416 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RaraP11416 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RaraP11416 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
RaraP11416 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RaraP11416 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RaraP11416 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RaraP11416 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RaraP11416 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
RaraP11416 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.77□□□□□ -0.21
RaraP11416 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Gm11803-201ENSMUST00000119966 444 ntBASIC13.77□□□□□ -0.21
RaraP11416 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
RaraP11416 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Gm12091-201ENSMUST00000146791 830 ntBASIC13.77□□□□□ -0.21
RaraP11416 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.77□□□□□ -0.21
RaraP11416 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.77□□□□□ -0.21
RaraP11416 Gm8810-201ENSMUST00000172895 754 ntBASIC13.77□□□□□ -0.21
RaraP11416 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.77□□□□□ -0.21
RaraP11416 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.77□□□□□ -0.21
RaraP11416 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.77□□□□□ -0.21
RaraP11416 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.77□□□□□ -0.21
RaraP11416 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.77□□□□□ -0.21
RaraP11416 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.77□□□□□ -0.21
RaraP11416 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.77□□□□□ -0.21
RaraP11416 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.77□□□□□ -0.21
RaraP11416 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Gm6180-201ENSMUST00000065243 498 ntBASIC13.77□□□□□ -0.21
RaraP11416 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RaraP11416 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.77□□□□□ -0.21
RaraP11416 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
RaraP11416 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
RaraP11416 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.77□□□□□ -0.21
RaraP11416 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RaraP11416 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.76□□□□□ -0.21
RaraP11416 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RaraP11416 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RaraP11416 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RaraP11416 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
RaraP11416 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
RaraP11416 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RaraP11416 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RaraP11416 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.76□□□□□ -0.21
RaraP11416 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Gm14928-201ENSMUST00000120198 477 ntBASIC13.76□□□□□ -0.21
RaraP11416 Gm16479-201ENSMUST00000121706 932 ntBASIC13.76□□□□□ -0.21
RaraP11416 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Gm23984-201ENSMUST00000157139 203 ntBASIC13.76□□□□□ -0.21
RaraP11416 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
RaraP11416 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.76□□□□□ -0.21
RaraP11416 Gm45384-201ENSMUST00000210451 277 ntBASIC13.76□□□□□ -0.21
RaraP11416 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.76□□□□□ -0.21
RaraP11416 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.76□□□□□ -0.21
RaraP11416 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
RaraP11416 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RaraP11416 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.76□□□□□ -0.21
RaraP11416 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms