Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PtcraP0C6B2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Gm16379-201ENSMUST00000161469 348 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Gm8762-201ENSMUST00000193486 339 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Gm43433-201ENSMUST00000196573 481 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Snora73a-201ENSMUST00000082453 205 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.11□□□□□ -0.63
PtcraP0C6B2 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.11□□□□□ -0.63
PtcraP0C6B2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Gm27731-201ENSMUST00000185192 107 ntBASIC11.1□□□□□ -0.63
PtcraP0C6B2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Gm38092-201ENSMUST00000195600 653 ntBASIC11.1□□□□□ -0.63
PtcraP0C6B2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.1□□□□□ -0.63
PtcraP0C6B2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.1□□□□□ -0.63
PtcraP0C6B2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PtcraP0C6B2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms