Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Gm11978-201ENSMUST00000122315 466 ntBASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Gm2231-201ENSMUST00000125661 612 ntBASIC13.91□□□□□ -0.18
Chmp6P0C0A3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp6P0C0A3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Gm12384-201ENSMUST00000119228 919 ntBASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Gm14660-201ENSMUST00000119809 575 ntBASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.9□□□□□ -0.18
Chmp6P0C0A3 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.9□□□□□ -0.18
Chmp6P0C0A3 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Gm10268-201ENSMUST00000085340 555 ntBASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp6P0C0A3 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.9□□□□□ -0.18
Chmp6P0C0A3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.9□□□□□ -0.19
Chmp6P0C0A3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Chmp6P0C0A3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Mir7085-201ENSMUST00000184353 66 ntBASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms