Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.05■□□□□ -0
Col3a1P08121 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.05■□□□□ -0
Col3a1P08121 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Gm13461-201ENSMUST00000120980 662 ntBASIC15.05■□□□□ -0
Col3a1P08121 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.05■□□□□ -0
Col3a1P08121 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.05■□□□□ -0
Col3a1P08121 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.05■□□□□ -0
Col3a1P08121 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.05■□□□□ -0
Col3a1P08121 AC154680.1-201ENSMUST00000224376 859 ntBASIC15.05■□□□□ -0
Col3a1P08121 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC15.05■□□□□ -0
Col3a1P08121 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Col3a1P08121 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.05■□□□□ -0
Col3a1P08121 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Col3a1P08121 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col3a1P08121 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col3a1P08121 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.04■□□□□ -0
Col3a1P08121 Gm11989-201ENSMUST00000117240 672 ntBASIC15.04■□□□□ -0
Col3a1P08121 Gm11362-201ENSMUST00000118838 850 ntBASIC15.04■□□□□ -0
Col3a1P08121 Gm11331-201ENSMUST00000119764 288 ntBASIC15.04■□□□□ -0
Col3a1P08121 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC15.04■□□□□ -0
Col3a1P08121 Gm18730-201ENSMUST00000218038 343 ntBASIC15.04■□□□□ -0
Col3a1P08121 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col3a1P08121 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col3a1P08121 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col3a1P08121 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.04■□□□□ -0
Col3a1P08121 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.04■□□□□ -0
Col3a1P08121 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Col3a1P08121 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.04■□□□□ -0
Col3a1P08121 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col3a1P08121 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Col3a1P08121 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.03■□□□□ -0
Col3a1P08121 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Col3a1P08121 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col3a1P08121 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Gm12266-201ENSMUST00000120311 962 ntBASIC15.03■□□□□ -0
Col3a1P08121 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.03■□□□□ -0
Col3a1P08121 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.03■□□□□ -0
Col3a1P08121 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.03■□□□□ -0
Col3a1P08121 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Col3a1P08121 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col3a1P08121 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Col3a1P08121 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC15.03■□□□□ -0
Col3a1P08121 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Col3a1P08121 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col3a1P08121 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col3a1P08121 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col3a1P08121 Gm23949-201ENSMUST00000104027 127 ntBASIC15.02■□□□□ -0
Col3a1P08121 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms