Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Gm15823-201ENSMUST00000064305 670 ntBASIC10.38□□□□□ -0.75
P04212 Gm16372-201ENSMUST00000073088 450 ntBASIC10.38□□□□□ -0.75
P04212 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
P04212 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
P04212 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
P04212 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.38□□□□□ -0.75
P04212 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.38□□□□□ -0.75
P04212 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04212 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
P04212 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.37□□□□□ -0.75
P04212 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
P04212 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.37□□□□□ -0.75
P04212 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
P04212 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.37□□□□□ -0.75
P04212 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.37□□□□□ -0.75
P04212 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
P04212 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.37□□□□□ -0.75
P04212 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.37□□□□□ -0.75
P04212 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
P04212 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
P04212 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.37□□□□□ -0.75
P04212 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.37□□□□□ -0.75
P04212 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
P04212 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.37□□□□□ -0.75
P04212 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.37□□□□□ -0.75
P04212 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.37□□□□□ -0.75
P04212 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.37□□□□□ -0.75
P04212 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.37□□□□□ -0.75
P04212 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.37□□□□□ -0.75
P04212 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.37□□□□□ -0.75
P04212 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
P04212 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
P04212 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
P04212 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.37□□□□□ -0.75
P04212 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P04212 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
P04212 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04212 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.36□□□□□ -0.75
P04212 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04212 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04212 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04212 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04212 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04212 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P04212 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.36□□□□□ -0.75
P04212 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms