Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.03□□□□□ -0.48
Krt1P04104 Gm11745-201ENSMUST00000121669 448 ntBASIC12.03□□□□□ -0.48
Krt1P04104 Mir1897-201ENSMUST00000122581 272 ntBASIC12.03□□□□□ -0.48
Krt1P04104 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.03□□□□□ -0.48
Krt1P04104 Gm29541-201ENSMUST00000191351 678 ntBASIC12.03□□□□□ -0.48
Krt1P04104 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.03□□□□□ -0.48
Krt1P04104 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Gm24447-201ENSMUST00000083977 338 ntBASIC12.03□□□□□ -0.48
Krt1P04104 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Krt1P04104 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.03□□□□□ -0.48
Krt1P04104 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Krt1P04104 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.03□□□□□ -0.48
Krt1P04104 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.03□□□□□ -0.48
Krt1P04104 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Krt1P04104 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Krt1P04104 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Krt1P04104 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Map1b-203ENSMUST00000223725 2669 ntBASIC12.03□□□□□ -0.48
Krt1P04104 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.03□□□□□ -0.48
Krt1P04104 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Krt1P04104 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Krt1P04104 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Krt1P04104 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Krt1P04104 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Krt1P04104 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Krt1P04104 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Krt1P04104 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Gm15240-201ENSMUST00000118156 720 ntBASIC12.02□□□□□ -0.49
Krt1P04104 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.02□□□□□ -0.49
Krt1P04104 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Krt1P04104 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.02□□□□□ -0.49
Krt1P04104 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.02□□□□□ -0.49
Krt1P04104 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.02□□□□□ -0.49
Krt1P04104 Gm8227-201ENSMUST00000223306 571 ntBASIC12.02□□□□□ -0.49
Krt1P04104 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.02□□□□□ -0.49
Krt1P04104 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Krt1P04104 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Krt1P04104 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Krt1P04104 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.02□□□□□ -0.49
Krt1P04104 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.02□□□□□ -0.49
Krt1P04104 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.02□□□□□ -0.49
Krt1P04104 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Krt1P04104 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt1P04104 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Krt1P04104 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Krt1P04104 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Krt1P04104 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Krt1P04104 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt1P04104 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.01□□□□□ -0.49
Krt1P04104 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.01□□□□□ -0.49
Krt1P04104 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.01□□□□□ -0.49
Krt1P04104 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Krt1P04104 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.01□□□□□ -0.49
Krt1P04104 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Krt1P04104 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Krt1P04104 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms