Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
H3f3cP02301 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
H3f3cP02301 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
H3f3cP02301 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.97□□□□□ -0.65
H3f3cP02301 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
H3f3cP02301 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
H3f3cP02301 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
H3f3cP02301 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.97□□□□□ -0.65
H3f3cP02301 Gm12384-201ENSMUST00000119228 919 ntBASIC10.97□□□□□ -0.65
H3f3cP02301 Gm16479-201ENSMUST00000121706 932 ntBASIC10.97□□□□□ -0.65
H3f3cP02301 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.97□□□□□ -0.65
H3f3cP02301 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.97□□□□□ -0.65
H3f3cP02301 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.97□□□□□ -0.65
H3f3cP02301 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
H3f3cP02301 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
H3f3cP02301 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
H3f3cP02301 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.97□□□□□ -0.65
H3f3cP02301 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.97□□□□□ -0.65
H3f3cP02301 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
H3f3cP02301 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.97□□□□□ -0.65
H3f3cP02301 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.97□□□□□ -0.65
H3f3cP02301 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.97□□□□□ -0.65
H3f3cP02301 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.97□□□□□ -0.65
H3f3cP02301 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
H3f3cP02301 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
H3f3cP02301 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.96□□□□□ -0.65
H3f3cP02301 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
H3f3cP02301 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
H3f3cP02301 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.96□□□□□ -0.65
H3f3cP02301 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.96□□□□□ -0.65
H3f3cP02301 Gm13226-201ENSMUST00000117838 404 ntBASIC10.96□□□□□ -0.65
H3f3cP02301 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.96□□□□□ -0.65
H3f3cP02301 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.96□□□□□ -0.65
H3f3cP02301 Gm27682-201ENSMUST00000183930 110 ntBASIC10.96□□□□□ -0.65
H3f3cP02301 Gm45784-201ENSMUST00000188360 142 ntBASIC10.96□□□□□ -0.65
H3f3cP02301 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.96□□□□□ -0.65
H3f3cP02301 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.96□□□□□ -0.65
H3f3cP02301 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.96□□□□□ -0.65
H3f3cP02301 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.96□□□□□ -0.65
H3f3cP02301 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.96□□□□□ -0.65
H3f3cP02301 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.96□□□□□ -0.65
H3f3cP02301 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H3f3cP02301 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
H3f3cP02301 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.96□□□□□ -0.65
H3f3cP02301 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
H3f3cP02301 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
H3f3cP02301 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
H3f3cP02301 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms