Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 AC151286.1-201ENSMUST00000198489 145 ntBASIC9.32□□□□□ -0.92
TcraP01849 Gm19931-201ENSMUST00000198920 368 ntBASIC9.32□□□□□ -0.92
TcraP01849 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Gm45484-201ENSMUST00000210310 1141 ntBASIC9.32□□□□□ -0.92
TcraP01849 Dupd1-202ENSMUST00000224735 548 ntBASIC9.32□□□□□ -0.92
TcraP01849 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Gm3222-201ENSMUST00000071282 990 ntBASIC9.32□□□□□ -0.92
TcraP01849 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
TcraP01849 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
TcraP01849 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
TcraP01849 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.32□□□□□ -0.92
TcraP01849 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
TcraP01849 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.31□□□□□ -0.92
TcraP01849 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.31□□□□□ -0.92
TcraP01849 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC9.31□□□□□ -0.92
TcraP01849 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Gm26308-201ENSMUST00000157768 69 ntBASIC9.31□□□□□ -0.92
TcraP01849 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC9.31□□□□□ -0.92
TcraP01849 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Gm27430-201ENSMUST00000184585 107 ntBASIC9.31□□□□□ -0.92
TcraP01849 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Gm44333-201ENSMUST00000197168 107 ntBASIC9.31□□□□□ -0.92
TcraP01849 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.31□□□□□ -0.92
TcraP01849 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.31□□□□□ -0.92
TcraP01849 Gm5779-201ENSMUST00000218467 910 ntBASIC9.31□□□□□ -0.92
TcraP01849 AC140397.2-201ENSMUST00000224213 834 ntBASIC9.31□□□□□ -0.92
TcraP01849 Chchd1-203ENSMUST00000224633 557 ntBASIC9.31□□□□□ -0.92
TcraP01849 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
TcraP01849 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC9.31□□□□□ -0.92
TcraP01849 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.31□□□□□ -0.92
TcraP01849 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.31□□□□□ -0.92
TcraP01849 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
TcraP01849 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
TcraP01849 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TcraP01849 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
TcraP01849 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.3□□□□□ -0.92
TcraP01849 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.3□□□□□ -0.92
TcraP01849 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.3□□□□□ -0.92
TcraP01849 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms