Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.76□□□□□ -0.69
Ifna1P01572 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.76□□□□□ -0.69
Ifna1P01572 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ifna1P01572 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ifna1P01572 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
Ifna1P01572 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.75□□□□□ -0.69
Ifna1P01572 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.75□□□□□ -0.69
Ifna1P01572 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.75□□□□□ -0.69
Ifna1P01572 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Ifna1P01572 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.75□□□□□ -0.69
Ifna1P01572 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.75□□□□□ -0.69
Ifna1P01572 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Ifna1P01572 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.75□□□□□ -0.69
Ifna1P01572 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ifna1P01572 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.75□□□□□ -0.69
Ifna1P01572 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ifna1P01572 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.75□□□□□ -0.69
Ifna1P01572 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.74□□□□□ -0.69
Ifna1P01572 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Ifna1P01572 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Ifna1P01572 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Ifna1P01572 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.74□□□□□ -0.69
Ifna1P01572 Mir686-201ENSMUST00000102174 109 ntBASIC10.74□□□□□ -0.69
Ifna1P01572 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.74□□□□□ -0.69
Ifna1P01572 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.74□□□□□ -0.69
Ifna1P01572 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.74□□□□□ -0.69
Ifna1P01572 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.74□□□□□ -0.69
Ifna1P01572 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.74□□□□□ -0.69
Ifna1P01572 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ifna1P01572 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Ifna1P01572 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.74□□□□□ -0.69
Ifna1P01572 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.74□□□□□ -0.69
Ifna1P01572 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ifna1P01572 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms