Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.53□□□□□ -0.4
ClppO88696 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.53□□□□□ -0.4
ClppO88696 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
ClppO88696 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClppO88696 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
ClppO88696 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.52□□□□□ -0.4
ClppO88696 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClppO88696 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClppO88696 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClppO88696 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ClppO88696 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.52□□□□□ -0.4
ClppO88696 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClppO88696 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ClppO88696 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClppO88696 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClppO88696 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
ClppO88696 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ClppO88696 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.52□□□□□ -0.41
ClppO88696 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
ClppO88696 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Gm13123-201ENSMUST00000122173 492 ntBASIC12.52□□□□□ -0.41
ClppO88696 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.52□□□□□ -0.41
ClppO88696 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.52□□□□□ -0.41
ClppO88696 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.52□□□□□ -0.41
ClppO88696 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.52□□□□□ -0.41
ClppO88696 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.52□□□□□ -0.41
ClppO88696 Gm43118-201ENSMUST00000199149 775 ntBASIC12.52□□□□□ -0.41
ClppO88696 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.52□□□□□ -0.41
ClppO88696 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.52□□□□□ -0.41
ClppO88696 Gm9257-201ENSMUST00000221254 232 ntBASIC12.52□□□□□ -0.41
ClppO88696 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.52□□□□□ -0.41
ClppO88696 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
ClppO88696 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
ClppO88696 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
ClppO88696 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.52□□□□□ -0.41
ClppO88696 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
ClppO88696 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
ClppO88696 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
ClppO88696 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
ClppO88696 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.52□□□□□ -0.41
ClppO88696 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
ClppO88696 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.52□□□□□ -0.41
ClppO88696 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClppO88696 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.51□□□□□ -0.41
ClppO88696 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ClppO88696 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
ClppO88696 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ClppO88696 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ClppO88696 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Gm6447-201ENSMUST00000118905 835 ntBASIC12.51□□□□□ -0.41
ClppO88696 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.51□□□□□ -0.41
ClppO88696 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.51□□□□□ -0.41
ClppO88696 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.51□□□□□ -0.41
ClppO88696 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.51□□□□□ -0.41
ClppO88696 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.51□□□□□ -0.41
ClppO88696 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.51□□□□□ -0.41
ClppO88696 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
ClppO88696 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms