Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.67□□□□□ -0.38
Ldb2O55203 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.67□□□□□ -0.38
Ldb2O55203 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.67□□□□□ -0.38
Ldb2O55203 Gm25261-201ENSMUST00000157416 134 ntBASIC12.67□□□□□ -0.38
Ldb2O55203 Gm25927-201ENSMUST00000175058 117 ntBASIC12.67□□□□□ -0.38
Ldb2O55203 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ldb2O55203 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 AY702102-202ENSMUST00000194651 1173 ntBASIC12.67□□□□□ -0.38
Ldb2O55203 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.67□□□□□ -0.38
Ldb2O55203 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.67□□□□□ -0.38
Ldb2O55203 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.67□□□□□ -0.38
Ldb2O55203 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ldb2O55203 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ldb2O55203 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ldb2O55203 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ldb2O55203 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb2O55203 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.66□□□□□ -0.38
Ldb2O55203 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.66□□□□□ -0.38
Ldb2O55203 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ldb2O55203 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.66□□□□□ -0.38
Ldb2O55203 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.66□□□□□ -0.38
Ldb2O55203 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ldb2O55203 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.66□□□□□ -0.38
Ldb2O55203 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ldb2O55203 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.66□□□□□ -0.38
Ldb2O55203 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Gm15703-201ENSMUST00000120250 880 ntBASIC12.66□□□□□ -0.38
Ldb2O55203 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ldb2O55203 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.66□□□□□ -0.38
Ldb2O55203 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.66□□□□□ -0.38
Ldb2O55203 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Gm24526-201ENSMUST00000082921 158 ntBASIC12.66□□□□□ -0.38
Ldb2O55203 Gm26035-201ENSMUST00000083065 308 ntBASIC12.66□□□□□ -0.38
Ldb2O55203 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb2O55203 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ldb2O55203 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ldb2O55203 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.65□□□□□ -0.38
Ldb2O55203 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.65□□□□□ -0.38
Ldb2O55203 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ldb2O55203 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.65□□□□□ -0.38
Ldb2O55203 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb2O55203 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.65□□□□□ -0.38
Ldb2O55203 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ldb2O55203 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ldb2O55203 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms