Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.78□□□□□ -0.68
Cxcl13O55038 Gm26110-201ENSMUST00000083971 165 ntBASIC10.78□□□□□ -0.68
Cxcl13O55038 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 Mir433-201ENSMUST00000093564 124 ntBASIC10.78□□□□□ -0.68
Cxcl13O55038 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Cxcl13O55038 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.78□□□□□ -0.68
Cxcl13O55038 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cxcl13O55038 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.77□□□□□ -0.68
Cxcl13O55038 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cxcl13O55038 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cxcl13O55038 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cxcl13O55038 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cxcl13O55038 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cxcl13O55038 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.77□□□□□ -0.68
Cxcl13O55038 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
Cxcl13O55038 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cxcl13O55038 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cxcl13O55038 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cxcl13O55038 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cxcl13O55038 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Cxcl13O55038 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Cxcl13O55038 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cxcl13O55038 Gm15276-201ENSMUST00000145953 498 ntBASIC10.77□□□□□ -0.69
Cxcl13O55038 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Gm27046-201ENSMUST00000182160 463 ntBASIC10.77□□□□□ -0.69
Cxcl13O55038 Gm3096-201ENSMUST00000185770 364 ntBASIC10.77□□□□□ -0.69
Cxcl13O55038 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.77□□□□□ -0.69
Cxcl13O55038 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.77□□□□□ -0.69
Cxcl13O55038 Grk6-205ENSMUST00000224653 2976 ntBASIC10.77□□□□□ -0.69
Cxcl13O55038 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Cxcl13O55038 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.77□□□□□ -0.69
Cxcl13O55038 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.77□□□□□ -0.69
Cxcl13O55038 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cxcl13O55038 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Cxcl13O55038 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cxcl13O55038 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cxcl13O55038 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm2383-201ENSMUST00000181461 807 ntBASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm38317-201ENSMUST00000195564 343 ntBASIC10.76□□□□□ -0.69
Cxcl13O55038 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cxcl13O55038 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.76□□□□□ -0.69
Cxcl13O55038 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.76□□□□□ -0.69
Cxcl13O55038 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.76□□□□□ -0.69
Cxcl13O55038 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cxcl13O55038 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.76□□□□□ -0.69
Cxcl13O55038 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms