Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.6□□□□□ -0.55
Matn3O35701 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.6□□□□□ -0.55
Matn3O35701 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Matn3O35701 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.6□□□□□ -0.55
Matn3O35701 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.6□□□□□ -0.55
Matn3O35701 Gm6415-201ENSMUST00000118488 348 ntBASIC11.6□□□□□ -0.55
Matn3O35701 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Matn3O35701 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Gm27306-201ENSMUST00000183970 107 ntBASIC11.6□□□□□ -0.55
Matn3O35701 Gm35960-201ENSMUST00000202712 767 ntBASIC11.6□□□□□ -0.55
Matn3O35701 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.6□□□□□ -0.55
Matn3O35701 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.6□□□□□ -0.55
Matn3O35701 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Matn3O35701 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Matn3O35701 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Matn3O35701 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.59□□□□□ -0.55
Matn3O35701 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Matn3O35701 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.59□□□□□ -0.55
Matn3O35701 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Matn3O35701 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Matn3O35701 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.59□□□□□ -0.55
Matn3O35701 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Matn3O35701 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.59□□□□□ -0.55
Matn3O35701 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.59□□□□□ -0.55
Matn3O35701 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.59□□□□□ -0.55
Matn3O35701 Gm9630-201ENSMUST00000178304 885 ntBASIC11.59□□□□□ -0.55
Matn3O35701 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.59□□□□□ -0.55
Matn3O35701 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.59□□□□□ -0.55
Matn3O35701 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.59□□□□□ -0.55
Matn3O35701 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.59□□□□□ -0.55
Matn3O35701 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Matn3O35701 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Matn3O35701 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Matn3O35701 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.58□□□□□ -0.56
Matn3O35701 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Matn3O35701 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Matn3O35701 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.58□□□□□ -0.56
Matn3O35701 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.58□□□□□ -0.56
Matn3O35701 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Matn3O35701 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.58□□□□□ -0.56
Matn3O35701 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.58□□□□□ -0.56
Matn3O35701 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.58□□□□□ -0.56
Matn3O35701 Gm27437-201ENSMUST00000183429 107 ntBASIC11.58□□□□□ -0.56
Matn3O35701 Gm27618-201ENSMUST00000183671 60 ntBASIC11.58□□□□□ -0.56
Matn3O35701 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.58□□□□□ -0.56
Matn3O35701 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.58□□□□□ -0.56
Matn3O35701 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.58□□□□□ -0.56
Matn3O35701 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.58□□□□□ -0.56
Matn3O35701 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Matn3O35701 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.58□□□□□ -0.56
Matn3O35701 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Matn3O35701 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms