Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.12□□□□□ -0.63
Atf6bO35451 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Atf6bO35451 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atf6bO35451 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf6bO35451 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf6bO35451 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atf6bO35451 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atf6bO35451 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atf6bO35451 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf6bO35451 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf6bO35451 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf6bO35451 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf6bO35451 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.11□□□□□ -0.63
Atf6bO35451 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.11□□□□□ -0.63
Atf6bO35451 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.11□□□□□ -0.63
Atf6bO35451 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.11□□□□□ -0.63
Atf6bO35451 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Atf6bO35451 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.11□□□□□ -0.63
Atf6bO35451 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
Atf6bO35451 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Gm45784-201ENSMUST00000188360 142 ntBASIC11.11□□□□□ -0.63
Atf6bO35451 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.11□□□□□ -0.63
Atf6bO35451 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.11□□□□□ -0.63
Atf6bO35451 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.11□□□□□ -0.63
Atf6bO35451 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Atf6bO35451 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.11□□□□□ -0.63
Atf6bO35451 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Atf6bO35451 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.11□□□□□ -0.63
Atf6bO35451 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Atf6bO35451 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Atf6bO35451 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6bO35451 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Atf6bO35451 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Atf6bO35451 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf6bO35451 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf6bO35451 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Atf6bO35451 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf6bO35451 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.1□□□□□ -0.63
Atf6bO35451 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Atf6bO35451 Gm16177-201ENSMUST00000120728 718 ntBASIC11.1□□□□□ -0.63
Atf6bO35451 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Atf6bO35451 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf6bO35451 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf6bO35451 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Gm28693-202ENSMUST00000190758 331 ntBASIC11.1□□□□□ -0.63
Atf6bO35451 Gm43818-201ENSMUST00000200605 466 ntBASIC11.1□□□□□ -0.63
Atf6bO35451 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.1□□□□□ -0.63
Atf6bO35451 Gm6458-201ENSMUST00000211573 635 ntBASIC11.1□□□□□ -0.63
Atf6bO35451 Gm40466-201ENSMUST00000212174 422 ntBASIC11.1□□□□□ -0.63
Atf6bO35451 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Gm10146-201ENSMUST00000072739 309 ntBASIC11.1□□□□□ -0.63
Atf6bO35451 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Atf6bO35451 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.1□□□□□ -0.63
Atf6bO35451 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.1□□□□□ -0.63
Atf6bO35451 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms