Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ebf3O08791 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ebf3O08791 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.26□□□□□ -0.29
Ebf3O08791 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ebf3O08791 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.26□□□□□ -0.29
Ebf3O08791 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ebf3O08791 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.26□□□□□ -0.29
Ebf3O08791 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ebf3O08791 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ebf3O08791 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.26□□□□□ -0.29
Ebf3O08791 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.26□□□□□ -0.29
Ebf3O08791 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ebf3O08791 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.26□□□□□ -0.29
Ebf3O08791 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Gm30285-201ENSMUST00000214614 422 ntBASIC13.26□□□□□ -0.29
Ebf3O08791 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ebf3O08791 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ebf3O08791 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Ebf3O08791 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.26□□□□□ -0.29
Ebf3O08791 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.26□□□□□ -0.29
Ebf3O08791 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Ebf3O08791 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.25□□□□□ -0.29
Ebf3O08791 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.25□□□□□ -0.29
Ebf3O08791 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.25□□□□□ -0.29
Ebf3O08791 Mir7070-201ENSMUST00000183657 86 ntBASIC13.25□□□□□ -0.29
Ebf3O08791 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.25□□□□□ -0.29
Ebf3O08791 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Gm5363-201ENSMUST00000211927 938 ntBASIC13.25□□□□□ -0.29
Ebf3O08791 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.25□□□□□ -0.29
Ebf3O08791 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ebf3O08791 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.25□□□□□ -0.29
Ebf3O08791 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ebf3O08791 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Ebf3O08791 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf3O08791 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf3O08791 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf3O08791 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.24□□□□□ -0.29
Ebf3O08791 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ebf3O08791 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf3O08791 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Ebf3O08791 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf3O08791 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Ebf3O08791 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms