Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Gm13384-201ENSMUST00000117166 1344 ntBASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Gm5638-201ENSMUST00000118618 1258 ntBASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 AC153954.1-201ENSMUST00000216959 255 ntBASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Gm26035-201ENSMUST00000083065 308 ntBASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp6G5E8P0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Gm8100-201ENSMUST00000182906 988 ntBASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Gm11980-201ENSMUST00000121445 986 ntBASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Gm14760-201ENSMUST00000121831 999 ntBASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Gm4879-201ENSMUST00000122190 1272 ntBASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Gm19091-201ENSMUST00000208120 978 ntBASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 AC122408.1-201ENSMUST00000218949 218 ntBASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Gm10288-201ENSMUST00000084614 537 ntBASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Tubgcp6G5E8P0 Gm9129-201ENSMUST00000218173 1689 ntBASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Gm8894-201ENSMUST00000074642 666 ntBASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubgcp6G5E8P0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms