Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Gm25881-201ENSMUST00000157783 103 ntBASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Gm4607-201ENSMUST00000206649 577 ntBASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Gm807-202ENSMUST00000224929 408 ntBASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcf11G3X9Z4 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Gm8038-201ENSMUST00000164674 2044 ntBASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Pcf11G3X9Z4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Gm11667-201ENSMUST00000119828 486 ntBASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Gm1821-202ENSMUST00000227415 750 ntBASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcf11G3X9Z4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Gm12165-201ENSMUST00000117047 342 ntBASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Gm43184-201ENSMUST00000197247 542 ntBASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Gm10109-202ENSMUST00000206890 1211 ntBASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcf11G3X9Z4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC18.93■□□□□ 0.62
Pcf11G3X9Z4 Gm10731-201ENSMUST00000181171 448 ntBASIC18.93■□□□□ 0.62
Pcf11G3X9Z4 Mir7032-201ENSMUST00000185154 79 ntBASIC18.93■□□□□ 0.62
Pcf11G3X9Z4 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms