Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NpcdF8VQB8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
NpcdF8VQB8 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.33■□□□□ 0.05
NpcdF8VQB8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NpcdF8VQB8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
NpcdF8VQB8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NpcdF8VQB8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
NpcdF8VQB8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Gm12165-201ENSMUST00000117047 342 ntBASIC15.33■□□□□ 0.04
NpcdF8VQB8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Gm14704-201ENSMUST00000120300 874 ntBASIC15.33■□□□□ 0.04
NpcdF8VQB8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC15.33■□□□□ 0.04
NpcdF8VQB8 Gm45598-202ENSMUST00000210719 986 ntBASIC15.33■□□□□ 0.04
NpcdF8VQB8 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.33■□□□□ 0.04
NpcdF8VQB8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC15.33■□□□□ 0.04
NpcdF8VQB8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.33■□□□□ 0.04
NpcdF8VQB8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NpcdF8VQB8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Gm11340-201ENSMUST00000119226 412 ntBASIC15.32■□□□□ 0.04
NpcdF8VQB8 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.32■□□□□ 0.04
NpcdF8VQB8 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NpcdF8VQB8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NpcdF8VQB8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NpcdF8VQB8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.31■□□□□ 0.04
NpcdF8VQB8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.31■□□□□ 0.04
NpcdF8VQB8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Gm23949-201ENSMUST00000104027 127 ntBASIC15.31■□□□□ 0.04
NpcdF8VQB8 Gm12380-201ENSMUST00000119012 544 ntBASIC15.31■□□□□ 0.04
NpcdF8VQB8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.31■□□□□ 0.04
NpcdF8VQB8 Gm38210-201ENSMUST00000191944 809 ntBASIC15.31■□□□□ 0.04
NpcdF8VQB8 AY036118-201ENSMUST00000200021 923 ntBASIC15.31■□□□□ 0.04
NpcdF8VQB8 Gm19187-201ENSMUST00000206781 892 ntBASIC15.31■□□□□ 0.04
NpcdF8VQB8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC15.31■□□□□ 0.04
NpcdF8VQB8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms