Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Gm3786-201ENSMUST00000202659 378 ntBASIC15.27■□□□□ 0.04
Ube4aE9Q735 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4aE9Q735 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4aE9Q735 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Ube4aE9Q735 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.27■□□□□ 0.03
Ube4aE9Q735 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.27■□□□□ 0.03
Ube4aE9Q735 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.27■□□□□ 0.03
Ube4aE9Q735 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4aE9Q735 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4aE9Q735 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4aE9Q735 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4aE9Q735 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube4aE9Q735 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.26■□□□□ 0.03
Ube4aE9Q735 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.26■□□□□ 0.03
Ube4aE9Q735 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Gm24231-201ENSMUST00000104315 133 ntBASIC15.26■□□□□ 0.03
Ube4aE9Q735 Gm23200-201ENSMUST00000104379 132 ntBASIC15.26■□□□□ 0.03
Ube4aE9Q735 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.26■□□□□ 0.03
Ube4aE9Q735 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Gm12566-201ENSMUST00000121479 359 ntBASIC15.26■□□□□ 0.03
Ube4aE9Q735 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Gm24749-201ENSMUST00000157838 343 ntBASIC15.26■□□□□ 0.03
Ube4aE9Q735 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.26■□□□□ 0.03
Ube4aE9Q735 Gm37666-201ENSMUST00000194110 866 ntBASIC15.26■□□□□ 0.03
Ube4aE9Q735 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.26■□□□□ 0.03
Ube4aE9Q735 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Acot6-202ENSMUST00000222921 3622 ntBASIC15.26■□□□□ 0.03
Ube4aE9Q735 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube4aE9Q735 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.25■□□□□ 0.03
Ube4aE9Q735 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ube4aE9Q735 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Gm17812-201ENSMUST00000204935 318 ntBASIC15.25■□□□□ 0.03
Ube4aE9Q735 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ube4aE9Q735 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms