Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
Herc1E9PZP8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Herc1E9PZP8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm25562-201ENSMUST00000104608 133 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm43671-201ENSMUST00000200422 433 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm44917-201ENSMUST00000208798 520 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm38348-201ENSMUST00000191718 2273 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm7805-201ENSMUST00000154348 448 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Zfp389-202ENSMUST00000224437 1234 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Rnf17-202ENSMUST00000223627 2077 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm8899-201ENSMUST00000214635 1332 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm16425-201ENSMUST00000118143 3130 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm6652-201ENSMUST00000186414 1070 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 AC153152.3-201ENSMUST00000222188 1135 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm29340-201ENSMUST00000188763 3854 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm15033-201ENSMUST00000118188 673 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm14633-201ENSMUST00000121152 470 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm14113-201ENSMUST00000121399 976 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm27440-201ENSMUST00000184785 107 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Zcwpw2-203ENSMUST00000187803 372 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm43244-201ENSMUST00000196994 1285 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Gm8618-201ENSMUST00000097570 432 ntBASIC6.89□□□□□ -1.31
Herc1E9PZP8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Herc1E9PZP8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Gm2445-201ENSMUST00000182798 989 ntBASIC6.88□□□□□ -1.31
Herc1E9PZP8 Gm44506-201ENSMUST00000206278 965 ntBASIC6.88□□□□□ -1.31
Herc1E9PZP8 Gm44908-201ENSMUST00000208610 266 ntBASIC6.88□□□□□ -1.31
Herc1E9PZP8 AC121567.1-201ENSMUST00000227213 842 ntBASIC6.88□□□□□ -1.31
Herc1E9PZP8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Gm24934-201ENSMUST00000103764 111 ntBASIC6.88□□□□□ -1.31
Herc1E9PZP8 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC6.88□□□□□ -1.31
Herc1E9PZP8 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Gm19015-201ENSMUST00000184002 1189 ntBASIC6.88□□□□□ -1.31
Herc1E9PZP8 BB187690-201ENSMUST00000198619 1176 ntBASIC6.88□□□□□ -1.31
Herc1E9PZP8 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
Herc1E9PZP8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms