Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28043E0CXC2 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Gm28911-201ENSMUST00000188837 117 ntBASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Gm26315-201ENSMUST00000083890 321 ntBASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28043E0CXC2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28043E0CXC2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms