Protein–RNA interactions for Protein: D3Z6J4

Vpreb3, Pre-B lymphocyte gene 3, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vpreb3D3Z6J4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Gm12485-201ENSMUST00000119641 291 ntBASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Gm14767-201ENSMUST00000121559 586 ntBASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Gm5312-201ENSMUST00000203728 547 ntBASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vpreb3D3Z6J4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gm27430-201ENSMUST00000184585 107 ntBASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gm44333-201ENSMUST00000197168 107 ntBASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gm43703-201ENSMUST00000200523 763 ntBASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 AC159114.1-201ENSMUST00000220349 266 ntBASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 AC154305.4-201ENSMUST00000224520 614 ntBASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 AC134335.2-201ENSMUST00000227660 440 ntBASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Gm37391-201ENSMUST00000194891 2318 ntBASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vpreb3D3Z6J4 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms