Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Gm27838-201ENSMUST00000184829 128 ntBASIC11.33□□□□□ -0.6
Gm11127A7VMS2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Gm44124-201ENSMUST00000204159 472 ntBASIC11.33□□□□□ -0.6
Gm11127A7VMS2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Gm9797-201ENSMUST00000052902 613 ntBASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm11127A7VMS2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Gm12485-201ENSMUST00000119641 291 ntBASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Mir7684-201ENSMUST00000183858 60 ntBASIC11.32□□□□□ -0.6
Gm11127A7VMS2 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Gm11127A7VMS2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gm11127A7VMS2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms