Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Gm11956-201ENSMUST00000119525 512 ntBASIC10.23□□□□□ -0.77
Chd6A3KFM7 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.23□□□□□ -0.77
Chd6A3KFM7 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.23□□□□□ -0.77
Chd6A3KFM7 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.23□□□□□ -0.77
Chd6A3KFM7 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.23□□□□□ -0.77
Chd6A3KFM7 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd6A3KFM7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm22711-201ENSMUST00000116890 133 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm8199-201ENSMUST00000121323 823 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm29651-201ENSMUST00000189088 697 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm2965-201ENSMUST00000198365 343 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm4157-201ENSMUST00000211647 679 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.22□□□□□ -0.77
Chd6A3KFM7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd6A3KFM7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Gm12470-201ENSMUST00000117239 1049 ntBASIC10.21□□□□□ -0.77
Chd6A3KFM7 Defa-ps16-201ENSMUST00000121939 171 ntBASIC10.21□□□□□ -0.77
Chd6A3KFM7 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC10.21□□□□□ -0.77
Chd6A3KFM7 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.21□□□□□ -0.77
Chd6A3KFM7 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.21□□□□□ -0.77
Chd6A3KFM7 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms