Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm3436-201ENSMUST00000179930 840 ntBASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm27622-201ENSMUST00000183779 60 ntBASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm2756-201ENSMUST00000195851 400 ntBASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm7774-201ENSMUST00000200064 533 ntBASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms