Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav5-4A0A075B652 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Gm14350-201ENSMUST00000116642 640 ntBASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Gm16202-201ENSMUST00000117532 544 ntBASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav5-4A0A075B652 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.71□□□□□ -0.7
Trav5-4A0A075B652 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.7
Trav5-4A0A075B652 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav5-4A0A075B652 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav5-4A0A075B652 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Gm5687-201ENSMUST00000118252 640 ntBASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Gm6152-201ENSMUST00000151704 340 ntBASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms