Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm1401-201ENSMUST00000122048 772 ntBASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gm9727-201ENSMUST00000161387 555 ntBASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Mir8117-201ENSMUST00000184773 107 ntBASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 AC158529.1-201ENSMUST00000223618 239 ntBASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm4971-201ENSMUST00000205991 1108 ntBASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm18057-201ENSMUST00000208220 503 ntBASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm45484-201ENSMUST00000210310 1141 ntBASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 AC149588.3-201ENSMUST00000227515 150 ntBASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms