Protein–RNA interactions for Protein: Q9Z2A0

Pdpk1, 3-phosphoinositide-dependent protein kinase 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdpk1Q9Z2A0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdpk1Q9Z2A0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Gm11637-201ENSMUST00000120601 592 ntBASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdpk1Q9Z2A0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Pdpk1Q9Z2A0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdpk1Q9Z2A0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms