Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ap4s1Q9WVL1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ap4s1Q9WVL1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ap4s1Q9WVL1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Gm7774-201ENSMUST00000200064 533 ntBASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ap4s1Q9WVL1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms