Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Gm13369-201ENSMUST00000119442 987 ntBASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Gm24644-201ENSMUST00000157114 139 ntBASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Gm8602-201ENSMUST00000184045 607 ntBASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Gm6091-201ENSMUST00000098307 165 ntBASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClcnkaQ9WUB7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Mir686-201ENSMUST00000102174 109 ntBASIC11.78□□□□□ -0.52
ClcnkaQ9WUB7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms