Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Gm14999-201ENSMUST00000121039 624 ntBASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn8aQ9WTU3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Scn8aQ9WTU3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms