Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atp6ap1Q9R1Q9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atp6ap1Q9R1Q9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atp6ap1Q9R1Q9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atp6ap1Q9R1Q9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atp6ap1Q9R1Q9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atp6ap1Q9R1Q9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Snord83b-201ENSMUST00000104546 94 ntBASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm14660-201ENSMUST00000119809 575 ntBASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atp6ap1Q9R1Q9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atp6ap1Q9R1Q9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Mir1982-201ENSMUST00000157368 74 ntBASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms