Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AmfrQ9R049 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AmfrQ9R049 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
AmfrQ9R049 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
AmfrQ9R049 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.3□□□□□ -0.12
AmfrQ9R049 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Gm11618-201ENSMUST00000117946 267 ntBASIC14.3□□□□□ -0.12
AmfrQ9R049 Gm11978-201ENSMUST00000122315 466 ntBASIC14.3□□□□□ -0.12
AmfrQ9R049 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
AmfrQ9R049 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Gm43818-201ENSMUST00000200605 466 ntBASIC14.3□□□□□ -0.12
AmfrQ9R049 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
AmfrQ9R049 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
AmfrQ9R049 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
AmfrQ9R049 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.3□□□□□ -0.12
AmfrQ9R049 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.3□□□□□ -0.12
AmfrQ9R049 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AmfrQ9R049 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.29□□□□□ -0.12
AmfrQ9R049 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
AmfrQ9R049 Gm23931-201ENSMUST00000103842 109 ntBASIC14.29□□□□□ -0.12
AmfrQ9R049 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.29□□□□□ -0.12
AmfrQ9R049 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.29□□□□□ -0.12
AmfrQ9R049 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.29□□□□□ -0.12
AmfrQ9R049 Snora78-201ENSMUST00000158630 128 ntBASIC14.29□□□□□ -0.12
AmfrQ9R049 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Gm26927-201ENSMUST00000182385 965 ntBASIC14.29□□□□□ -0.12
AmfrQ9R049 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.29□□□□□ -0.12
AmfrQ9R049 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
AmfrQ9R049 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AmfrQ9R049 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
AmfrQ9R049 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.29□□□□□ -0.12
AmfrQ9R049 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AmfrQ9R049 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
AmfrQ9R049 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.28□□□□□ -0.12
AmfrQ9R049 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
AmfrQ9R049 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.28□□□□□ -0.12
AmfrQ9R049 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.28□□□□□ -0.12
AmfrQ9R049 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.28□□□□□ -0.12
AmfrQ9R049 Gm13123-201ENSMUST00000122173 492 ntBASIC14.28□□□□□ -0.12
AmfrQ9R049 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.28□□□□□ -0.12
AmfrQ9R049 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.28□□□□□ -0.12
AmfrQ9R049 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.28□□□□□ -0.12
AmfrQ9R049 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
AmfrQ9R049 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms