Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a4Q9QZR9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a4Q9QZR9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a4Q9QZR9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a4Q9QZR9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Col4a4Q9QZR9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm13351-201ENSMUST00000118087 414 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm5257-201ENSMUST00000121823 790 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm17070-201ENSMUST00000170463 784 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm3726-201ENSMUST00000203110 785 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm14005-208ENSMUST00000223654 681 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm5451-201ENSMUST00000080545 579 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm15003-201ENSMUST00000118884 446 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Gm16380-201ENSMUST00000077997 478 ntBASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a4Q9QZR9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gm23272-201ENSMUST00000104053 129 ntBASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gm20414-201ENSMUST00000172918 646 ntBASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gm43752-201ENSMUST00000198475 697 ntBASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gm8342-201ENSMUST00000209839 757 ntBASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gm23680-201ENSMUST00000083162 164 ntBASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms