Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clcf1Q9QZM3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Gm25927-201ENSMUST00000175058 117 ntBASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Gm38002-201ENSMUST00000193255 180 ntBASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clcf1Q9QZM3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Gm37008-201ENSMUST00000195712 319 ntBASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Gm6013-201ENSMUST00000212264 699 ntBASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Gm45880-201ENSMUST00000213041 853 ntBASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Gm19309-201ENSMUST00000218295 205 ntBASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clcf1Q9QZM3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms