Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SrfQ9JM73 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.1□□□□□ -0.47
SrfQ9JM73 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm14644-201ENSMUST00000116671 647 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm9062-201ENSMUST00000117712 727 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm12314-201ENSMUST00000118104 538 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm16112-201ENSMUST00000159075 382 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm18734-201ENSMUST00000172937 808 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm20426-201ENSMUST00000173657 440 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm27627-201ENSMUST00000183644 150 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm8581-201ENSMUST00000188636 890 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm5708-201ENSMUST00000196289 886 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm42516-201ENSMUST00000198691 767 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 AU022133-201ENSMUST00000200601 873 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SrfQ9JM73 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Spcs1-203ENSMUST00000226374 592 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.1□□□□□ -0.47
SrfQ9JM73 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SrfQ9JM73 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SrfQ9JM73 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm13611-201ENSMUST00000118269 318 ntBASIC12.09□□□□□ -0.47
SrfQ9JM73 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm13813-201ENSMUST00000120998 787 ntBASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.09□□□□□ -0.47
SrfQ9JM73 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm9230-201ENSMUST00000188228 532 ntBASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm37835-201ENSMUST00000193305 361 ntBASIC12.09□□□□□ -0.47
SrfQ9JM73 AY036118-201ENSMUST00000200021 923 ntBASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm44100-201ENSMUST00000204329 436 ntBASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.09□□□□□ -0.47
SrfQ9JM73 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm7848-201ENSMUST00000210739 718 ntBASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.09□□□□□ -0.47
SrfQ9JM73 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms